Items where Author is "McNally, A"

Journal article

SEECHARRAN, T., KALIN-MANTTARI, L., KOSKELA, K., NIKKARI, S., DICKINS, B., CORANDER, J., SKURNIK, M. and MCNALLY, A., 2017. Phylogeographic separation and formation of sexually discrete lineages in a global population of Yersinia pseudotuberculosis. Microbial Genomics. ISSN 2057-5858

MCNALLY, A., THOMSON, N.R., REUTER, S. and WREN, B.W., 2016. 'Add, stir and reduce': Yersinia spp. as model bacteria for pathogen evolution. Nature Reviews Microbiology, 14 (3), pp. 177-190. ISSN 1740-1526

ALHASHASH, F., WANG, X., PASZKIEWICZ, K., DIGGLE, M., ZONG, Z. and MCNALLY, A., 2016. Increase in bacteraemia cases in the East Midlands region of the UK due to MDREscherichia coliST73: high levels of genomic and plasmid diversity in causative isolates. Journal of Antimicrobial Chemotherapy, 71 (2), pp. 339-343. ISSN 0305-7453

BAIG, A., MCNALLY, A., DUNN, S., PASZKIEWICZ, K.H., CORANDER, J. and MANNING, G., 2015. Genetic import and phenotype specific alleles associated with hyper-invasion in Campylobacter jejuni. BMC Genomics, 16 (1). ISSN 1471-2164

THOMSON, N.R., REUTER, S., DE BEEN, M., HALL, M., HARRIS, S., MCNALLY, A., CHENG, L. and CORANDER, J., 2015. Directional gene flow and ecological separation in Yersinia enterocolitica. Microbial Genomics. ISSN 2057-5858

FENG, Y., YANG, P., XIE, Y., WANG, X., MCNALLY, A. and ZONG, Z., 2015. Escherichia coli of sequence type 3835 carrying blaNDM-1, blaCTX-M-15, blaCMY-42 and blaSHV-12. Scientific Reports, 5. ISSN 2045-2322

MORLEY, L., MCNALLY, A., PASZKIEWICZ, K., CORANDER, J., MÉRIC, G., SHEPPARD, S.K., BLOM, J. and MANNING, G., 2015. Gene loss and lineage specific restriction-modification systems associated with niche differentiation in the Campylobacter jejuni Sequence Type 403 clonal complex. Applied and Environmental Microbiology, 81 (11), pp. 3641-3647. ISSN 1098-5336

MASOOD, N., MOORE, K., FARBOS, A., PASZKIEWICZ, K., DICKINS, B., MCNALLY, A. and FORSYTHE, S., 2015. Genomic dissection of the 1994 Cronobacter sakazakii outbreak in a French neonatal intensive care unit. BMC Genomics, 16. ISSN 1471-2164

DARCH, S.E., MCNALLY, A., HARRISON, F., CORANDER, J., BARR, H.L., PASZCKIEWICZ, K., HOLDEN, S., FOGARTY, A., CRUSZ, S.A. and DIGGLE, S.P., 2015. Recombination is a key driver of genomic and phenotypic diversity in a Pseudomonas aeruginosa population during cystic fibrosis infection. Scientific Reports, 5 (1): 7649. ISSN 2045-2322

HALL, M., CHATTAWAY, M.A., REUTER, S., SAVIN, C., STRAUCH, E., CARNIEL, E., CONNOR, T., VAN DAMME, I., RAJAKARUNA, L., RAJENDRAM, D., JENKINS, C., THOMSON, N.R. and MCNALLY, A., 2015. Use of whole-genus genome sequence data to develop a multilocus sequence typing tool that accurately identifies Yersinia isolates to the species and subspecies levels. Journal of Clinical Microbiology, 53 (1), pp. 35-42. ISSN 1098-660X

ALQASIM, A., SCHEUTZ, F., ZONG, Z. and MCNALLY, A., 2014. Comparative genome analysis identifies few traits unique to the Escherichia coli ST131 H30Rx clade and extensive mosaicism at the capsule locus. BMC Genomics, 15 (1). ISSN 1471-2164

MASOOD, N., JACKSON, E., MOORE, K., FARBOS, A., PASZCKIEWICZ, K., DICKINS, B., MCNALLY, A. and FORSYTHE, S., 2014. Draft genome sequence of "Candidatus Cronobacter colletis" NCTC 14934T, a new species in the genus Cronobacter. Genome Announcements, 2 (3), e00585. ISSN 2169-8287

REUTER, S., CONNOR, T.R., BARQUIST, L., WALKER, D., FELTWELL, T., HARRIS, S.R., FOOKES, M., HALL, M.E., PETTY, N.K., FUCHS, T.M., CORANDER, J., DUFOUR, M., RINGWOOD, T., SAVIN, C., BOUCHIER, C., MARTIN, L., MIETTINEN, M., SHUBIN, M., RIEHM, J.M., LAUKKANEN-NINIOS, R., SIHVONEN, L.M., SIITONEN, A., SKURNIK, M., FALCÃO, J.P., FUKUSHIMA, H., SCHOLZ, H.C., PRENTICE, M.B., WREN, B.W., PARKHILL, J., CARNIEL, J., ACHTMAN, M., MCNALLY, A. and THOMSON, N.R., 2014. Parallel independent evolution of pathogenicity within the genus Yersinia. Proceedings of the National Academy of Sciences of the United States of America, 111 (18), pp. 6768-6773. ISSN 0027-8424

ALQASIM, A., EMES, R., CLARK, G., NEWCOMBE, J., LA RAGIONE, R. and MCNALLY, A., 2014. Phenotypic microarrays suggest Escherichia coli ST131 is not a metabolically distinct lineage of extra-intestinal pathogenic E. coli. PLoS ONE, 9 (2). ISSN 1932-6203

MASOOD, N., MOORE, K., FARBOS, A., HARIRI, S., BLOCK, C., PASZCKIEWICZ, K., DICKINS, B., MCNALLY, A. and FORSYTHE, S., 2013. Draft genome sequence of a meningitic isolate of Cronobacter sakazakii clonal complex 4, strain 8399. Genome Announcements, 1 (5), e00833-13. ISSN 2169-8287

MASOOD, N., MOORE, K., FARBOS, A., HARIRI, S., PASZCKIEWICZ, K., DICKINS, B., MCNALLY, A. and FORSYTHE, S., 2013. Draft genome sequence of the earliest Cronobacter sakazakii sequence type 4 strain, NCIMB 8272. Genome Announcements, 1 (5), e00782-13. ISSN 2169-8287

MASOOD, N., MOORE, K., FARBOS, A., HARIRI, S., PASZCKIEWICZ, K., DICKINS, B., MCNALLY, A. and FORSYTHE, S., 2013. Draft genome sequences of three newly identified species in the genus Cronobacter, C. helveticus LMG23732T, C. pulveris LMG24059, and C. zurichensis LMG23730T. Genome Announcements, 1 (5), e00783-13. ISSN 2169-8287

MCNALLY, A., ALHASHASH, F., COLLINS, M., ALQASIM, A., PASZCKIEWICZ, K., WESTON, V. and DIGGLE, M., 2013. Genomic analysis of extra-intestinal pathogenic Escherichia coli urosepsis. Clinical Microbiology and Infection, 19 (8). ISSN 1198-743X

MCNALLY, A., 2013. Magnetic sensors: nanoparticles detect infection. Nature Nanotechnology, 8, pp. 315-316. ISSN 1748-3387

ALHASHASH, F., WESTON, V., DIGGLE, M. and MCNALLY, A., 2013. Multidrug-resistant Escherichia coli bacteremia [letter]. Emerging Infectious Diseases, 19 (10), pp. 1699-1701. ISSN 1080-6040

MCNALLY, A., CHENG, L., HARRIS, S.R. and CORANDER, J., 2013. The evolutionary path to extra intestinal pathogenic, drug resistant Escherichia coli is marked by drastic reduction in detectable recombination within the core genome. Infection and Immunity, 5 (4), pp. 699-710. ISSN 1759-6653

JAVED, M.A., CAWTHRAW, S.A., BAIG, A., LI, J., MCNALLY, A., OLDFIELD, N., NEWELL, D. and MANNING, G., 2012. Cj1136 is required for LOS biosynthesis, hyperinvasion and chick colonization by Campylobacter jejuni. Infection and Immunity, 80 (7), pp. 2361-2370.

REUTER, S., THOMSON, N.R. and MCNALLY, A., 2012. Evolutionary dynamics of the Yersinia enterocolitica complex. Advances in Experimental and Medical Biology, 954, pp. 15-22.

CLARK, G., PASZKIEWICZ, K., HALE, J., WESTON, V., CONSTANTINIDOU, C., PENN, C.W., ACHTMAN, M. and MCNALLY, A., 2012. Genomic analysis uncovers a phenotypically diverse but genetically homogeneous Escherichia coli ST131 clone circulating in unrelated urinary tract infections. Journal of Antimicrobial Chemotherapy, 67 (4), pp. 868-877. ISSN 1460-2091

CROXALL, G. and MCNALLY, A., 2011. Author's reply to 'Pathogenesis of Escherichia coli from polymicrobial urinary tract infections'. Journal of Medical Microbiology, 60 (10), pp. 1554-1555.

CROXALL, G., WESTON, V., JOSEPH, S., MANNING, G., CHEETHAM, P. and MCNALLY, A., 2011. Increased human pathogenic potential of Escherichia coli from polymicrobial urinary tract infections in comparison to isolates from monomicrobial culture samples. Journal of Medical Microbiology, 60 (1), pp. 102-109. ISSN 0022-2615

CROXALL, G., HALE, J., WESTON, V., MANNING, G., CHEETHAM, P., ACHTMAN, M. and MCNALLY, A., 2011. Molecular epidemiology of extraintestinal pathogenic 'Escherichia coli' isolates from a regional cohort of elderly patients highlights the prevalence of ST131 strains with increased antimicrobial resistance in both community and hospital care settings. Journal of Antimicrobial Chemotherapy, 66 (11), pp. 2501-2508. ISSN 1460-2091

ALDOUS, E.W., SEEKINGS, J.M., MCNALLY, A., NILI, H., IRVINE, R.M., ALEXANDER, D.J. and BROWN, I.H., 2010. Infection dynamics of highly pathogenic avian influenza and virulent avian paramyxovirus type 1 viruses in chickens, turkeys and ducks. Avian Pathology, 39, pp. 265-273.

INCE, J. and MCNALLY, A., 2009. Development of rapid, automated diagnostics for infectious disease: advances and challenges. Expert Reviews of Medical Devices, 6 (6), pp. 641-651.

NILI, H., MCNALLY, A., ALDOUS, E., NUNEZ, A., BANKS, J. and BROWN, I.H., 2008. Pathological changes in turkeys experimentally infected with different doses of A/ostrich/Italy/984/2000 H7N1 avian influenza virus. Iranian Journal of Veterinary Research, 9 (4).

MCNALLY, A., LA RAGIONE, R.M., BEST, A., MANNING, G. and NEWELL, D.G., 2007. An aflagellate mutant Yersinia enterocolitica biotype 1A strain displays altered invasion of epithelial cells, persistence in macrophages, and cytokine secretion profiles in vitro. Microbiology, 153 (5), pp. 1339-1349.

MCNALLY, A., DALTON, T., LA, R., STAPLETON, K., MANNING, G. and NEWELL, D., 2006. Yersinia enterocolitica isolates of differing biotypes from humans and animals are adherent, invasive and persist in macrophages, but differ in cytokine secretion profiles in vitro. Journal of Medical Microbiology, 55, pp. 1725-1734. ISSN 0022-2615

MCNALLY, A., CHEASTY, T., FEARNLEY, C., DALZIEL, R.W., PAIBA, G.A., MANNING, G. and NEWELL, D.G., 2004. Comparison of the biotypes of Yersinia enterocolitica isolated from pigs, cattle and sheep at slaughter and from humans with yersiniosis in Great Britain during 1999-2000. Letters in Applied Microbiology, 39 (1), pp. 103-108.

MCNALLY, A., ROE, A.J., SIMPSON, S., THOMSON-CARTER, F.M., HOEY, D.E., CURRIE, C., CHAKRABORTY, T., SMITH, D.G. and GALLY, D.L., 2001. Differences in levels of secreted locus of enterocyte effacement proteins between human disease-associated and bovine Escherichia coli O157. Infection and Immunity, 69 (8), pp. 5107-5114. ISSN 0019-9567

Chapter in book

MCNALLY, A., THOMSON, N.R. and WREN, B.W., 2011. Genomics of the enteropathogenic Yersiniae. In: P. FRATAMICO, Y. LIU and S. KATHARIOU, eds., Genomes of foodborne and waterborne pathogens. American Society for Microbiology, pp. 101-111. ISBN 9781555814571

Journal editorship

SLOMKA, M.J., PAVLIDIS, T., BANKS, J., SHELL, W., MCNALLY, A., ESSEN, S. and BROWN, I.H., 2007. Avian diseases. AAAP.

MILNES, A.S., STEWART, I., CLIFTON-HADLEY, F.A., DAVIES, R.H., NEWELL, D.G., SAYERS, A.R., CHEASTY, T., CASSAR, C., RIDLEY, A., COOK, A.J., EVANS, S.J., TEALE, C.J., SMITH, R.P., MCNALLY, A., TOSZEGHY, M., FUTTER, R., KAY, A. and PAIBA, G.A., 2007. Epidemiology and infection. Cambridge Journals.

Thesis

MCNALLY, A., 2016. "Every picture tells a story". A study of those who gather and accumulate legal and illegal images. PhD, Nottingham Trent University.